5LNK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 3PE, CDL, FES, FMN, NDP, PC1, PNS, SF4, ZMP, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
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j, X


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p
  • NADH dehydrogenase (ubiquino...


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  • NADH dehydrogenase activity


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    Primary referenceAtomic structure of the entire mammalian mitochondrial complex I., Fiedorczuk K, Letts JA, Degliesposti G, Kaszuba K, Skehel M, Sazanov LA, Nature. 2016 Sep 5;538(7625):406-410. doi: 10.1038/nature19794. PMID:27595392
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1186 Kb) [Save to disk]
  • Biological Unit Coordinates (5lnk.pdb1.gz) 1166 Kb
  • LPC: Ligand-Protein Contacts for 5LNK
  • CSU: Contacts of Structural Units for 5LNK
  • Retrieve 5LNK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LNK from S2C, [Save to disk]
    • View 5LNK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lnk] [5lnk_1] [5lnk_2] [5lnk_3] [5lnk_4] [5lnk_5] [5lnk_6] [5lnk_9] [5lnk_A] [5lnk_H] [5lnk_J] [5lnk_K] [5lnk_L] [5lnk_M] [5lnk_N] [5lnk_V] [5lnk_W] [5lnk_X] [5lnk_Y] [5lnk_Z] [5lnk_a] [5lnk_b] [5lnk_c] [5lnk_d] [5lnk_e] [5lnk_f] [5lnk_g] [5lnk_h] [5lnk_i] [5lnk_j] [5lnk_k] [5lnk_l] [5lnk_m] [5lnk_n] [5lnk_o] [5lnk_p] [5lnk_q] [5lnk_r] [5lnk_s] [5lnk_t] [5lnk_u] [5lnk_v] [5lnk_w] [5lnk_x] [5lnk_y] [5lnk_z]
  • SWISS-PROT database:
  • Domains found in 5LNK: [L51_S25_CI-B8] [NADH-G_4Fe-4S_3] [NADH_4Fe-4S ] by SMART

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