5LOX Hydrolase date Aug 10, 2016
title Helical Assembly Of The Anbu Complex From Pseudomonas Aerugi
authors A.C.D.Fuchs, R.Albrecht, J.Martin, M.D.Hartmann
compound source
Molecule: Peptidase
Chain: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R V, W, X, Y, Z, 1, 2, 3, 4, 5, 6, 7, 8;
Synonym: Ancestral Beta Subunit
Engineered: Yes
Mutation: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 287
Gene: Ao946_34255, Paerug_e15_london_28_01_14_04292, Paerug_p32_london_17_vim_2_10_11_02206;
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.198 R_Free 0.218
crystal
cell
length a length b length c angle alpha angle beta angle gamma
150.070 230.080 171.720 90.00 108.39 90.00
method X-Ray Diffractionresolution 2.90 Å
Gene
Ontology
ChainFunctionProcessComponent
S, T, N, K, 7, Y, E, 2, Z, 1, J, W, B, H, D, I, G, U, F, V, Q, M, C, L, A, 6, O, 3, X, P, 8, 4, R, 5


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2674 Kb) [Save to disk]
  • Biological Unit Coordinates (5lox.pdb1.gz) 2645 Kb
  • CSU: Contacts of Structural Units for 5LOX
  • Structure Factors (5070 Kb)
  • Retrieve 5LOX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LOX from S2C, [Save to disk]
  • Re-refined 5lox structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5LOX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5LOX
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5lox from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lox_1] [5lox_4] [5lox_Q] [5lox_5] [5lox_V] [5lox_E] [5lox_6] [5lox_K] [5lox_3] [5lox_S] [5lox_P] [5lox_O] [5lox_C] [5lox_X] [5lox_F] [5lox_G] [5lox_2] [5lox_B] [5lox_Y] [5lox_W] [5lox_A] [5lox_T] [5lox_R] [5lox_Z] [5lox_D] [5lox_U] [5lox_8] [5lox_J] [5lox_H] [5lox_M] [5lox_I] [5lox_L] [5lox_7] [5lox_N]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5LOX
  • Community annotation for 5LOX at PDBWiki (http://pdbwiki.org)

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