5LOX Hydrolase date Aug 10, 2016
title Helical Assembly Of The Anbu Complex From Pseudomonas Aerugi
authors A.C.D.Fuchs, R.Albrecht, J.Martin, M.D.Hartmann
compound source
Molecule: Peptidase
Chain: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R V, W, X, Y, Z, 1, 2, 3, 4, 5, 6, 7, 8;
Synonym: Ancestral Beta Subunit
Engineered: Yes
Mutation: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 287
Gene: Ao946_34255, Paerug_e15_london_28_01_14_04292, Paerug_p32_london_17_vim_2_10_11_02206;
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.198 R_Free 0.218
length a length b length c angle alpha angle beta angle gamma
150.070 230.080 171.720 90.00 108.39 90.00
method X-Ray Diffractionresolution 2.90 Å
S, T, N, K, 7, Y, E, 2, Z, 1, J, W, B, H, D, I, G, U, F, V, Q, M, C, L, A, 6, O, 3, X, P, 8, 4, R, 5

Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2674 Kb) [Save to disk]
  • Biological Unit Coordinates (5lox.pdb1.gz) 2645 Kb
  • CSU: Contacts of Structural Units for 5LOX
  • Structure Factors (5070 Kb)
  • Retrieve 5LOX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LOX from S2C, [Save to disk]
  • Re-refined 5lox structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5LOX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5LOX
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5lox from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lox_1] [5lox_4] [5lox_Q] [5lox_5] [5lox_V] [5lox_E] [5lox_6] [5lox_K] [5lox_3] [5lox_S] [5lox_P] [5lox_O] [5lox_C] [5lox_X] [5lox_F] [5lox_G] [5lox_2] [5lox_B] [5lox_Y] [5lox_W] [5lox_A] [5lox_T] [5lox_R] [5lox_Z] [5lox_D] [5lox_U] [5lox_8] [5lox_J] [5lox_H] [5lox_M] [5lox_I] [5lox_L] [5lox_7] [5lox_N]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5LOX
  • Community annotation for 5LOX at PDBWiki (http://pdbwiki.org)

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