5LUJ Hydrolase date Sep 08, 2016
title Structure Of Cutinase 2 From Thermobifida Cellulosilytica
authors A.Hromic, A.Lyskowski, K.Gruber
compound source
Molecule: Cutinase 2
Chain: A
Synonym: Cutinase
Engineered: Yes
Organism_scientific: Thermobifida Cellulosilytica
Organism_taxid: 144786
Gene: Cut2
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Gold
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet26b(+)
symmetry Space Group: P 2 21 21
R_factor 0.183 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
36.670 43.150 152.350 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand CL enzyme
Primary referenceSmall cause, large effect: Structural characterization of cutinases from Thermobifida cellulosilytica., Ribitsch D, Hromic A, Zitzenbacher S, Zartl B, Gamerith C, Pellis A, Jungbauer A, Lyskowski A, Steinkellner G, Gruber K, Tscheliessnig R, Acero EH, Guebitz GM, Biotechnol Bioeng. 2017 Jul 3. doi: 10.1002/bit.26372. PMID:28671263
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk]
  • Biological Unit Coordinates (5luj.pdb1.gz) 40 Kb
  • LPC: Ligand-Protein Contacts for 5LUJ
  • CSU: Contacts of Structural Units for 5LUJ
  • Structure Factors (256 Kb)
  • Retrieve 5LUJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LUJ from S2C, [Save to disk]
  • Re-refined 5luj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5LUJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5LUJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5luj_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5LUJ
  • Community annotation for 5LUJ at PDBWiki (http://pdbwiki.org)

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