5LUV Signaling Protein date Sep 12, 2016
title Short Lov Protein W619_1 In Apo-State
authors V.Arinkin, J.Granzin, R.Batra-Safferling
compound source
Molecule: Putative Paspac Sensor Protein
Chain: A, B
Synonym: W619_1-Lov
Engineered: Yes
Organism_scientific: Pseudomonas Putida
Organism_taxid: 390235
Strain: W619
Gene: Pputw619_0812
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
symmetry Space Group: I 41
R_factor 0.211 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
109.538 109.538 95.209 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand CL, SO4 enzyme
Gene PPUTW619
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (5luv.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 5LUV
  • CSU: Contacts of Structural Units for 5LUV
  • Structure Factors (235 Kb)
  • Retrieve 5LUV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LUV from S2C, [Save to disk]
  • Re-refined 5luv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5LUV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5LUV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5luv_A] [5luv_B] [5luv]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5LUV
  • Community annotation for 5LUV at PDBWiki (http://pdbwiki.org)

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