5LV0 Hydrolase date Sep 12, 2016
title Structure Of Human Neurolysin (E475q) In Complex With Amyloi 40 Peptide Product
authors G.Masuyer, R.P.A.Berntsson, P.F.Teixeira, B.Kmiec, E.Glaser, P.S
compound source
Molecule: Neurolysin, Mitochondrial
Chain: A, B
Synonym: Angiotensin-Binding Protein,Microsomal Endopeptida Mitochondrial Oligopeptidase M,Neurotensin Endopeptidase;
Ec: 3.4.24.16
Engineered: Yes
Mutation: Yes
Other_details: Catalytically Impaired Human Neurolysin
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nln, Agtbp, Kiaa1226
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Rosetta 2
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet-15b

Molecule: Gly-Val-Val Amyloid 35-40 Fragment
Chain: C, D
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 43 21 2
R_factor 0.210 R_Free 0.260
crystal
cell
length a length b length c angle alpha angle beta angle gamma
131.341 131.341 195.979 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand CL, ZN enzyme Hydrolase E.C.3.4.24.16 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (439 Kb) [Save to disk]
  • Biological Unit Coordinates (5lv0.pdb1.gz) 218 Kb
  • Biological Unit Coordinates (5lv0.pdb2.gz) 218 Kb
  • LPC: Ligand-Protein Contacts for 5LV0
  • CSU: Contacts of Structural Units for 5LV0
  • Structure Factors (3054 Kb)
  • Retrieve 5LV0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LV0 from S2C, [Save to disk]
  • View 5LV0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5LV0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lv0_C] [5lv0_B] [5lv0_A] [5lv0_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5LV0
  • Community annotation for 5LV0 at PDBWiki (http://pdbwiki.org)

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