5LWM Transferase date Sep 18, 2016
title Crystal Structure Of Jak3 In Complex With Compound 4 (Fm381)
authors A.Chaikuad, M.Forster, S.Mukhopadhyay, K.Kupinska, K.Ellis, P.Mah N.Burgess-Brown, A.M.Edwards, C.H.Arrowsmith, C.Bountra, S.A.La S.Knapp, Structural Genomics Consortium (Sgc)
compound source
Molecule: Tyrosine-Protein Kinase Jak3
Chain: A
Synonym: Janus Kinase 3,Jak-3,Leukocyte Janus Kinase,L-Jak
Ec: 2.7.10.2
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Jak3
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
symmetry Space Group: P 1 21 1
R_factor 0.163 R_Free 0.204
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.029 62.450 51.270 90.00 92.88 90.00
method X-Ray Diffractionresolution 1.55 Å
ligand 79T, EDO, PHU enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (108 Kb) [Save to disk]
  • Biological Unit Coordinates (5lwm.pdb1.gz) 102 Kb
  • LPC: Ligand-Protein Contacts for 5LWM
  • CSU: Contacts of Structural Units for 5LWM
  • Structure Factors (3419 Kb)
  • Retrieve 5LWM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LWM from S2C, [Save to disk]
  • Re-refined 5lwm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5LWM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5LWM
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lwm_A] [5lwm]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5LWM: [TyrKc ] by SMART
    • Other resources with information on 5LWM
  • Community annotation for 5LWM at PDBWiki (http://pdbwiki.org)

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