5LYI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand T4F, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSulfamide as Zinc Binding Motif in Small Molecule Inhibitors of Activated Thrombin Activatable Fibrinolysis Inhibitor (TAFIa)., Halland N, Czech J, Czechtizky W, Evers A, Follmann M, Kohlmann M, Schreuder HA, Kallus C, J Med Chem. 2016 Oct 17. PMID:27749053
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk]
  • Biological Unit Coordinates (5lyi.pdb1.gz) 62 Kb
  • LPC: Ligand-Protein Contacts for 5LYI
  • CSU: Contacts of Structural Units for 5LYI
  • Structure Factors (853 Kb)
  • Retrieve 5LYI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LYI from S2C, [Save to disk]
  • Re-refined 5lyi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5LYI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lyi] [5lyi_A]
  • SWISS-PROT database:
  • Domain found in 5LYI: [Zn_pept ] by SMART

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