5M5R	Endocytosis	date	Oct 22, 2016
title	Clathrin Heavy Chain N-Terminal Domain Bound To Beta2 Adapti Box Motif
authors	J.Muenzner, S.C.Graham
compound		source
Molecule: Clathrin Heavy Chain 1 Chain: A Engineered: Yes Other_details: N-Terminal Residues 'Gs' Are Residual Follow Cleavage Of The Purification Tag.;		Organism_scientific: Bos Taurus Organism_common: Bovine Organism_taxid: 9913 Gene: Cltc Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_variant: Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Popt3g
Molecule: Ap-2 Complex Subunit Beta Chain: C, D Fragment: Unp Residues 629-637 Synonym: Ap105b,Adaptor Protein Complex Ap-2 Subunit Beta,A Related Protein Complex 2 Subunit Beta,Beta-2-Adaptin,Beta- Clathrin Assembly Protein Complex 2 Beta Large Chain,Plasma Adaptor Ha2ap2 Adaptin Beta Subunit; Engineered: Yes Other_details: N-Terminal Residue 'C' Was Added To Facilita Chemical Modifications (Not Used In This Study)		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: C 2 2 21	R_factor 0.176 R_Free 0.205
crystal cell	length a length b length c angle alpha angle beta angle gamma 108.144 133.177 77.917 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.76 Å
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (130 Kb) [Save to disk] Biological Unit Coordinates (5m5r.pdb1.gz) 124 Kb CSU: Contacts of Structural Units for 5M5R Structure Factors (1218 Kb) Retrieve 5M5R in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5M5R from S2C, [Save to disk] Re-refined 5m5r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5M5R in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5M5R

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5m5r_A] [5m5r] [5m5r_D] [5m5r_C] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5M5R

Community annotation for 5M5R at PDBWiki (http://pdbwiki.org)

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