5M64 Transcription date Oct 24, 2016
title Rna Polymerase I Elongation Complex With A49 Tandem Winged H Domain
authors L.Tafur, Y.Sadian, N.A.Hoffmann, A.J.Jakobi, R.Wetzel, W.J.H.Hage C.Sachse, C.W.Muller
compound source
Molecule: Dna-Directed Rna Polymerase I Subunit Rpa190
Chain: A
Synonym: Dna-Directed Rna Polymerase I 190 Kda Polypeptide, Directed Rna Polymerase I Largest Subunit;
Ec: 2.7.7.6
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932

Molecule: Dna-Directed Rna Polymerase I Subunit Rpa135
Chain: B
Synonym: Dna-Directed Rna Polymerase I 135 Kda Polypeptide, Directed Rna Polymerase I Polypeptide 2,Rna Polymerase I Su
Ec: 2.7.7.6

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932

Molecule: Dna-Directed Rna Polymerases I And III Subunit Rp
Chain: C
Synonym: Rna Polymerases I And III Subunit Ac1,C37,Dna-Dire Polymerases I And III 40 Kda Polypeptide,C40;

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932

Molecule: Dna-Directed Rna Polymerase I Subunit Rpa14
Chain: D
Synonym: A14,Dna-Directed Rna Polymerase I 14 Kda Polypepti

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932

Molecule: Dna-Directed Rna Polymerases I, II, And III Subun
Chain: E
Synonym: Rna Polymerases I,II,And III Subunit Abc1,Abc27,Dn Rna Polymerases I,And III 27 Kda Polypeptide;

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932

Molecule: Dna-Directed Rna Polymerases I, II, And III Subun
Chain: F
Synonym: Rna Polymerases I,II,And III Subunit Abc2,Abc23,Dn Rna Polymerases I,And III 23 Kda Polypeptide;

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932

Molecule: Dna-Directed Rna Polymerase I Subunit Rpa43
Chain: G
Synonym: A43,Dna-Directed Dna-Dependent Rna Polymerase 36 K Polypeptide;

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932

Molecule: Dna-Directed Rna Polymerases I, II, And III Subun
Chain: H
Synonym: Rna Polymerases I,II,And III Subunit Abc3,Abc14.4, Dna-Directed Rna Polymerases I,And III 14.5 Kda Polypeptide

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932

Molecule: Dna-Directed Rna Polymerase I Subunit Rpa12
Chain: I
Synonym: A12,A12.2,Dna-Directed Rna Polymerase I 13.7 Kda Polypeptide;

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932

Molecule: Dna-Directed Rna Polymerases I, II, And III Subun
Chain: J
Synonym: Rna Polymerases I,II,And III Subunit Abc5,Abc10-Be Dna-Directed Rna Polymerases I,And III 8.3 Kda Polypeptide;

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932

Molecule: Dna-Directed Rna Polymerases I And III Subunit Rp
Chain: K
Synonym: Rna Polymerases I And III Subunit Ac2,Ac19,Dna-Dir Polymerases I And III 16 Kda Polypeptide,Rpa19;

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932

Molecule: Dna-Directed Rna Polymerases I, II, And III Subun
Chain: L
Synonym: Rna Polymerases I,II,And III Subunit Abc4,Abc10-Al

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932

Molecule: Dna-Directed Rna Polymerase I Subunit Rpa49
Chain: M
Synonym: A49,Dna-Directed Rna Polymerase I 49 Kda Polypepti

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932

Molecule: Dna-Directed Rna Polymerase I Subunit Rpa34
Chain: N
Synonym: A34,Dna-Directed Dna-Dependent Rna Polymerase 34.5 Polypeptide,A34.5;

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932

Molecule: Non-Template Dna
Chain: S

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932

Molecule: Template Dna
Chain: T

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932

Molecule: Rna
Chain: R

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 4.60 Å
ligand ZN enzyme Transferase E.C.2.7.7.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B


C


D


E
  • RNA-directed 5'-3' RNA polym...


  • F
  • RNA-directed 5'-3' RNA polym...


  • G


    H
  • RNA-directed 5'-3' RNA polym...


  • I


    J
  • RNA-directed 5'-3' RNA polym...

  • DNA-directed RNA polymerase ...
  • K


    L
  • RNA-directed 5'-3' RNA polym...


  • M


    N


    Primary referenceMolecular Structures of Transcribing RNA Polymerase I., Tafur L, Sadian Y, Hoffmann NA, Jakobi AJ, Wetzel R, Hagen WJ, Sachse C, Muller CW, Mol Cell. 2016 Nov 16. pii: S1097-2765(16)30721-3. doi:, 10.1016/j.molcel.2016.11.013. PMID:27867008
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (727 Kb) [Save to disk]
  • Biological Unit Coordinates (5m64.pdb1.gz) 715 Kb
  • LPC: Ligand-Protein Contacts for 5M64
  • CSU: Contacts of Structural Units for 5M64
  • Retrieve 5M64 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5M64 from S2C, [Save to disk]
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  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5m64 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5m64_N] [5m64_G] [5m64_M] [5m64_T] [5m64_A] [5m64_F] [5m64_H] [5m64_I] [5m64_R] [5m64_E] [5m64_C] [5m64_J] [5m64_D] [5m64_S] [5m64_B] [5m64_K] [5m64] [5m64_L]
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