5M7G	Cell Cycle	date	Oct 27, 2016
title	Tubulin-Mtd147 Complex
authors	T.Bohnacker, A.E.Prota, M.O.Steinmetz, M.P.Wymann
compound		source
Molecule: Tubulin Alpha-1b Chain Chain: A, C Synonym: Alpha-Tubulin Ubiquitous,Tubulin K-Alpha-1,Tubulin Ubiquitous Chain;		Organism_scientific: Bos Taurus Organism_common: Bovine Organism_taxid: 9913 Organ: Brain
Molecule: Tubulin Beta-2b Chain Chain: B, D		Organism_scientific: Bos Taurus Organism_common: Bovine Organism_taxid: 9913 Organ: Brain
Molecule: Stathmin-4 Chain: E Synonym: Stathmin-Like Protein B3,Rb3 Engineered: Yes		Organism_scientific: Rattus Norvegicus Organism_common: Norway Rat Organism_taxid: 10116 Gene: Stmn4 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Tubulin-Tyrosine Ligase Chain: F Engineered: Yes		Organism_scientific: Gallus Gallus Organism_common: Chicken Organism_taxid: 9031 Gene: Ttl Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.172 R_Free 0.217
crystal cell	length a length b length c angle alpha angle beta angle gamma 104.083 156.864 179.684 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.25 Å
ligand	ACP, CA, FB7, GDP, GOL, GTP, MES, MG	enzyme
Gene Ontology	Chain Function Process Component A, C D, B E F
Primary reference	Deconvolution of Buparlisib's mechanism of action defines specific PI3K and tubulin inhibitors for therapeutic intervention., Bohnacker T, Prota AE, Beaufils F, Burke JE, Melone A, Inglis AJ, Rageot D, Sele AM, Cmiljanovic V, Cmiljanovic N, Bargsten K, Aher A, Akhmanova A, Diaz JF, Fabbro D, Zvelebil M, Williams RL, Steinmetz MO, Wymann MP, Nat Commun. 2017 Mar 9;8:14683. doi: 10.1038/ncomms14683. PMID:28276440

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (741 Kb) [Save to disk] Biological Unit Coordinates (5m7g.pdb1.gz) 729 Kb LPC: Ligand-Protein Contacts for 5M7G CSU: Contacts of Structural Units for 5M7G Structure Factors (1231 Kb) Retrieve 5M7G in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5M7G from S2C, [Save to disk] Re-refined 5m7g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5M7G in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5M7G

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5m7g_D] [5m7g] [5m7g_E] [5m7g_A] [5m7g_B] [5m7g_C] [5m7g_F] SWISS-PROT database: Domain organization of by SWISSPFAM

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