5MDG		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component E, W, G, F, A, D, B, C b, f, I, H, a, J
Primary reference	The structure and flexibility of conical HIV-1 capsids determined within intact virions., Mattei S, Glass B, Hagen WJ, Krausslich HG, Briggs JA, Science. 2016 Dec 16;354(6318):1434-1437. PMID:27980210

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk] Biological Unit Coordinates (5mdg.pdb1.gz) 99 Kb CSU: Contacts of Structural Units for 5MDG Retrieve 5MDG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5MDG from S2C, [Save to disk]

View 5MDG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5mdg_I] [5mdg] [5mdg_A] [5mdg_B] [5mdg_C] [5mdg_D] [5mdg_E] [5mdg_F] [5mdg_G] [5mdg_H] [5mdg_J] [5mdg_W] [5mdg_a] [5mdg_b] [5mdg_f] SWISS-PROT database:

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