5MEZ	Transcription	date	Nov 16, 2016
title	Crystal Structure Of Smad4-Mh1 Bound To The Ggct Site.
authors	Z.Kaczmarska, R.Freier, J.A.Marquez, M.J.Macias
compound		source
Molecule: Mh1 Domain Of Human Smad4 Chain: A, B Synonym: Mothers Against Dpp Homolog 4,Deletion Target In P Carcinoma 4,Smad Family Member 4,Hsmad4; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Smad4, Dpc4, Madh4 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Dna (5'-D(Pgpcpapgpgpcptpapgpcpcptpg 3'); Chain: D, E Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606
symmetry	Space Group: P 21 21 21	R_factor 0.217 R_Free 0.252
crystal cell	length a length b length c angle alpha angle beta angle gamma 64.790 79.060 114.160 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.98 Å
ligand	CL, ZN	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural basis for genome wide recognition of 5-bp GC motifs by SMAD transcription factors., Martin-Malpartida P, Batet M, Kaczmarska Z, Freier R, Gomes T, Aragon E, Zou Y, Wang Q, Xi Q, Ruiz L, Vea A, Marquez JA, Massague J, Macias MJ, Nat Commun. 2017 Dec 12;8(1):2070. doi: 10.1038/s41467-017-02054-6. PMID:29234012

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk] Biological Unit Coordinates (5mez.pdb1.gz) 75 Kb LPC: Ligand-Protein Contacts for 5MEZ CSU: Contacts of Structural Units for 5MEZ Structure Factors (410 Kb) Retrieve 5MEZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5MEZ from S2C, [Save to disk]

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Visual 3D analysis of 5MEZ

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5mez_E] [5mez_B] [5mez_D] [5mez_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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