5MF7	Transcription	date	Nov 17, 2016
title	New Insights Into The Role Of Dna Shape On Its Recognition B Proteins (Complex P53dbd-Gadd45)
authors	H.Rozenberg, Y.Diskin-Posner, D.Golovenko, Z.Shakked
compound		source
Molecule: Cellular Tumor Antigen P53 Chain: A, B Fragment: P53 Dna Binding Domain Synonym: Antigen Ny-Co-13,Phosphoprotein P53,Tumor Suppress Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tp53, P53 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet27-B
Molecule: Dna Chain: C Fragment: Dna Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 Other_details: Synthesised By Idt
symmetry	Space Group: C 1 2 1	R_factor 0.198 R_Free 0.233
crystal cell	length a length b length c angle alpha angle beta angle gamma 138.056 50.034 67.202 90.00 92.52 90.00
method	X-Ray Diffraction	resolution	1.59 Å
ligand	PEG, ZN	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	New Insights into the Role of DNA Shape on Its Recognition by p53 Proteins., Golovenko D, Brauning B, Vyas P, Haran TE, Rozenberg H, Shakked Z, Structure. 2018 Sep 4;26(9):1237-1250.e6. doi: 10.1016/j.str.2018.06.006. Epub, 2018 Jul 26. PMID:30057026

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (156 Kb) [Save to disk] Biological Unit Coordinates (5mf7.pdb1.gz) 296 Kb LPC: Ligand-Protein Contacts for 5MF7 CSU: Contacts of Structural Units for 5MF7 Structure Factors (2295 Kb) Retrieve 5MF7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5MF7 from S2C, [Save to disk]

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Visual 3D analysis of 5MF7

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5mf7_C] [5mf7_B] [5mf7_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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