5MGQ Protein Fibril date Nov 21, 2016
title Solution Structure Of Oxidized And Amidated Human Iapp (1-37 Diabetes II Peptide.
authors D.C.Rodriguez Camargo, K.Tripsianes, B.Reif
compound source
Molecule: Islet Amyloid Polypeptide
Chain: A
Synonym: Amylin,Diabetes-Associated Peptide,Dap,Insulinoma Peptide;
Engineered: Yes
Other_details: Residue Name "Tyc" Refers To Amidation Of C- Tyr.
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Iapp
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
methodSolution NMR
ligand TYC enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe redox environment triggers conformational changes and aggregation of hIAPP in Type II Diabetes., Rodriguez Camargo DC, Tripsianes K, Buday K, Franko A, Gobl C, Hartlmuller C, Sarkar R, Aichler M, Mettenleiter G, Schulz M, Boddrich A, Erck C, Martens H, Walch AK, Madl T, Wanker EE, Conrad M, de Angelis MH, Reif B, Sci Rep. 2017 Mar 13;7:44041. doi: 10.1038/srep44041. PMID:28287098
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (178 Kb) [Save to disk]
  • Biological Unit Coordinates (5mgq.pdb1.gz) 9 Kb
  • LPC: Ligand-Protein Contacts for 5MGQ
  • CSU: Contacts of Structural Units for 5MGQ
  • Original NMR restraints for 5MGQ from PDB
  • Retrieve 5MGQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5MGQ from S2C, [Save to disk]
    • View 5MGQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5MGQ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5mgq_A] [5mgq]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5MGQ
  • Community annotation for 5MGQ at PDBWiki (http://pdbwiki.org)

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