OCA Atlas for 5MLY

5MLY

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
B, A

Primary reference

Structural basis of poly(3-hydroxybutyrate) hydrolysis by PhaZ7 depolymerase from Paucimonas lemoignei., Papageorgiou AC, Hermawan S, Singh CB, Jendrossek D, J Mol Biol. 2008 Oct 24;382(5):1184-94. Epub 2008 Aug 5. PMID:18706425

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (129 Kb) [Save to disk]

Biological Unit Coordinates (5mly.pdb1.gz) 62 Kb

Biological Unit Coordinates (5mly.pdb2.gz) 64 Kb

CSU: Contacts of Structural Units for 5MLY

Structure Factors (659 Kb)

Retrieve 5MLY in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5MLY from S2C, [Save to disk]

Re-refined 5mly structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5MLY in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5mly] [5mly_A] [5mly_B]

SWISS-PROT database:

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