5MQF		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	MSE	enzyme
Gene Ontology	Chain Function Process Component A metallopeptidase activity isopeptidase activity catalytic step 2 spliceosome... B C catalytic step 2 spliceosome... D catalytic step 2 spliceosome... E catalytic step 2 spliceosome... F catalytic step 2 spliceosome... G, H, J, I catalytic step 2 spliceosome... K L catalytic step 2 spliceosome... M transcription, DNA-templated... catalytic step 2 spliceosome... N catalytic step 2 spliceosome... O catalytic step 2 spliceosome... P catalytic step 2 spliceosome... Q ligand-dependent nuclear rec... R catalytic step 2 spliceosome... S catalytic step 2 spliceosome... T spliceosomal complex catalytic step 2 spliceosome... U catalytic step 2 spliceosome... V catalytic step 2 spliceosome... W spliceosomal complex catalytic step 2 spliceosome... X spliceosomal complex U2 snRNP catalytic step 2 spliceosome... d, k catalytic step 2 spliceosome... e, l catalytic step 2 spliceosome... h, a catalytic step 2 spliceosome... i, b catalytic step 2 spliceosome... j, c catalytic step 2 spliceosome... m, f catalytic step 2 spliceosome... n, g catalytic step 2 spliceosome... o catalytic step 2 spliceosome... p catalytic step 2 spliceosome... q catalytic step 2 spliceosome...
Primary reference	Cryo-EM structure of a human spliceosome activated for step 2 of splicing., Bertram K, Agafonov DE, Liu WT, Dybkov O, Will CL, Hartmuth K, Urlaub H, Kastner B, Stark H, Luhrmann R, Nature. 2017 Feb 16;542(7641):318-323. doi: 10.1038/nature21079. Epub 2017 Jan, 11. PMID:28076346

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1027 Kb) [Save to disk] Biological Unit Coordinates (5mqf.pdb1.gz) 945 Kb LPC: Ligand-Protein Contacts for 5MQF CSU: Contacts of Structural Units for 5MQF Retrieve 5MQF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5MQF from S2C, [Save to disk]

View 5MQF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5mqf] [5mqf_2] [5mqf_5] [5mqf_6] [5mqf_A] [5mqf_B] [5mqf_C] [5mqf_D] [5mqf_E] [5mqf_F] [5mqf_G] [5mqf_H] [5mqf_I] [5mqf_J] [5mqf_K] [5mqf_L] [5mqf_M] [5mqf_N] [5mqf_O] [5mqf_P] [5mqf_Q] [5mqf_R] [5mqf_S] [5mqf_T] [5mqf_U] [5mqf_V] [5mqf_W] [5mqf_X] [5mqf_Y] [5mqf_Z] [5mqf_a] [5mqf_b] [5mqf_c] [5mqf_d] [5mqf_e] [5mqf_f] [5mqf_g] [5mqf_h] [5mqf_i] [5mqf_j] [5mqf_k] [5mqf_l] [5mqf_m] [5mqf_n] [5mqf_o] [5mqf_p] [5mqf_q] SWISS-PROT database:

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