5MS0 | Transcription Dna Rna | date | Dec 29, 2016 |
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title | Pseudo-Atomic Model Of The Rna Polymerase Lambda-Based Antit Complex Solved By Cryo-Em | ||||||||||||||||||||||||||||||||||||||
authors | N.Said, F.Krupp | ||||||||||||||||||||||||||||||||||||||
compound | source | ||||||||||||||||||||||||||||||||||||||
Molecule: Antitermination Protein N Chain: N Synonym: Regulatory Protein N,Pn Engineered: Yes Other_details: Lambda N Factor |
Organism_scientific: Escherichia Phage Lambda Organism_common: Bacteriophage Lambda Organism_taxid: 10710 Gene: N, Lambdap49 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
Molecule: Nascent Rna Chain: R Engineered: Yes |
Organism_scientific: Escherichia Coli Organism_taxid: 562 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
Molecule: Dna-Directed Rna Polymerase Subunit Alpha Chain: A, B Synonym: Rnap Subunit Alpha,Rna Polymerase Subunit Alpha, Transcriptase Subunit Alpha; Ec: 2.7.7.6 Engineered: Yes |
Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Rpoa, Pez, Phs, Sez, B3295, Jw3257 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
Molecule: Dna-Directed Rna Polymerase Subunit Beta Chain: C Synonym: Rnap Subunit Beta,Rna Polymerase Subunit Beta,Tran Subunit Beta; Ec: 2.7.7.6 Engineered: Yes |
Organism_scientific: Escherichia Coli K-12 Organism_taxid: 83333 Gene: Rpob, Gron, Nitb, Rif, Ron, Stl, Stv, Tabd, B3987, Jw Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
Molecule: Dna-Directed Rna Polymerase Subunit Beta' Chain: D Synonym: Rnap Subunit Beta',Rna Polymerase Subunit Beta', Transcriptase Subunit Beta'; Ec: 2.7.7.6 Engineered: Yes |
Organism_scientific: Escherichia Coli K-12 Organism_taxid: 83333 Gene: Rpoc, Tabb, B3988, Jw3951 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
Molecule: 30s Ribosomal Protein S10 Chain: E Synonym: Small Ribosomal Subunit Protein Us10 Engineered: Yes |
Organism_scientific: Escherichia Coli K-12 Organism_taxid: 83333 Gene: Rpsj, Nuse, B3321, Jw3283 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
Molecule: Transcription Terminationantitermination Protein Chain: F Engineered: Yes |
Organism_scientific: Escherichia Coli K-12 Organism_taxid: 83333 Gene: Nusg, B3982, Jw3945 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
Molecule: Rna Transcription Bubble Chain: H Engineered: Yes |
Organism_scientific: Escherichia Coli Organism_taxid: 562 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
Molecule: Dnai Chain: I Engineered: Yes |
Organism_scientific: Escherichia Coli Organism_taxid: 562 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
Molecule: Dnaii Chain: J Engineered: Yes |
Organism_scientific: Escherichia Coli Organism_taxid: 562 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
Molecule: Transcription Antitermination Protein Nusb Chain: L Synonym: Antitermination Factor Nusb,N Utilization Substanc B; Engineered: Yes |
Organism_scientific: Escherichia Coli K-12 Organism_taxid: 83333 Gene: Nusb, Gronb, Ssyb, B0416, Jw0406 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
Molecule: Transcription Terminationantitermination Protein Chain: M Synonym: N Utilization Substance Protein A,Transcription Terminationantitermination L Factor; Engineered: Yes |
Organism_scientific: Escherichia Coli K-12 Organism_taxid: 83333 Gene: Nusa, B3169, Jw3138 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
Molecule: Dna-Directed Rna Polymerase Subunit Omega Chain: O Synonym: Rnap Omega Subunit,Rna Polymerase Omega Subunit, Transcriptase Subunit Omega; Ec: 2.7.7.6 Engineered: Yes |
Organism_scientific: Escherichia Coli K-12 Organism_taxid: 83333 Gene: Rpoz, B3649, Jw3624 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
symmetry | Space Group: P 1 |
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crystal cell |
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method | Electron Microscopy | resolution | 9.80 Å | ||||||||||||||||||||||||||||||||||||
ligand | MG, ZN | enzyme | Transferase E.C.2.7.7.6 BRENDA | ||||||||||||||||||||||||||||||||||||
Gene | AKG99 ; ECS88 | ||||||||||||||||||||||||||||||||||||||
Gene Ontology |
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Primary reference | Structural basis for lambdaN-dependent processive transcription antitermination., Said N, Krupp F, Anedchenko E, Santos KF, Dybkov O, Huang YH, Lee CT, Loll B, Behrmann E, Burger J, Mielke T, Loerke J, Urlaub H, Spahn CMT, Weber G, Wahl MC, Nat Microbiol. 2017 Apr 28;2:17062. doi: 10.1038/nmicrobiol.2017.62. PMID:28452979 |
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