5MVX	Signaling Protein	date	Jan 17, 2017
title	Human Dll4 C2-Egf3
authors	R.J.Suckling, P.A.Handford, S.M.Lea
compound		source
Molecule: Delta-Like Protein 4 Chain: A Synonym: Drosophila Delta Homolog 4,Delta4 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dll4, Unq1895pro4341 Expression_system: Drosophila Melanogaster Expression_system_common: Fruit Fly Expression_system_taxid: 7227 Expression_system_cell: Schneider 2 Expression_system_plasmid: Pexs2-2
symmetry	Space Group: C 1 2 1	R_factor 0.182 R_Free 0.229
crystal cell	length a length b length c angle alpha angle beta angle gamma 127.896 49.753 70.031 90.00 109.15 90.00
method	X-Ray Diffraction	resolution	2.17 Å
Gene Ontology	Chain Function Process Component A
Primary reference	Structural and functional dissection of the interplay between lipid and Notch binding by human Notch ligands., Suckling RJ, Korona B, Whiteman P, Chillakuri C, Holt L, Handford PA, Lea SM, EMBO J. 2017 Aug 1;36(15):2204-2215. doi: 10.15252/embj.201796632. Epub 2017 Jun , 1. PMID:28572448

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk] Biological Unit Coordinates (5mvx.pdb1.gz) 51 Kb CSU: Contacts of Structural Units for 5MVX Structure Factors (879 Kb) Retrieve 5MVX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5MVX from S2C, [Save to disk] Re-refined 5mvx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5MVX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5MVX

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute Fold representative 5mvx from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5mvx_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5MVX

Community annotation for 5MVX at PDBWiki (http://pdbwiki.org)

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