5N6W Structural Protein date Feb 16, 2017
title Retinoschisin R141h Mutant
authors E.P.Ramsay, R.F.Collins, T.W.Owens, C.A.Siebert, R.P.O.Jones, A.R T.Wang, C.Baldock
compound source
Molecule: Retinoschisin
Chain: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P
Synonym: X-Linked Juvenile Retinoschisis Protein
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rs1, Xlrs1
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293-Ebna
Expression_system_plasmid: Pcep-Puac7
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 4.20 Å
Gene
Ontology
ChainFunctionProcessComponent
F, N, K, E, M, C, L, A, J, O, P, B, H, D, I, G


Primary referenceStructural analysis of X-linked retinoschisis mutations reveals distinct classes which differentially effect retinoschisin function., Ramsay EP, Collins RF, Owens TW, Siebert CA, Jones RP, Wang T, Roseman AM, Baldock C, Hum Mol Genet. 2016 Oct 23. pii: ddw345. doi: 10.1093/hmg/ddw345. PMID:27798099
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (693 Kb) [Save to disk]
  • Biological Unit Coordinates (5n6w.pdb1.gz) 686 Kb
  • CSU: Contacts of Structural Units for 5N6W
  • Retrieve 5N6W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5N6W from S2C, [Save to disk]
  • View 5N6W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5N6W
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5n6w from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5n6w_C] [5n6w_N] [5n6w] [5n6w_E] [5n6w_H] [5n6w_B] [5n6w_F] [5n6w_A] [5n6w_J] [5n6w_P] [5n6w_K] [5n6w_I] [5n6w_M] [5n6w_D] [5n6w_L] [5n6w_G] [5n6w_O]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5N6W
  • Community annotation for 5N6W at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science