5N8A	Protein Binding	date	Feb 23, 2017
title	Structure Of Rpa70n In Complex With Primpol (Fragment 480-56
authors	N.C.Brissett, A.J.Doherty
compound		source
Molecule: Dna-Directed Primasepolymerase Protein Chain: X Fragment: Unp Residues 479-559 Synonym: Hprimpol1,Coiled-Coil Domain-Containing Protein 11 Ec: 2.7.7.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Primpol, Ccdc111 Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a
Molecule: Replication Protein A 70 Kda Dna-Binding Subunit Chain: A Synonym: Rp-A P70,Replication Factor A Protein 1,Rf-A Prote Single-Stranded Dna-Binding Protein; Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Rpa1, Repa1, Rpa70 Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b
symmetry	Space Group: P 21 21 21	R_factor 0.154 R_Free 0.179
crystal cell	length a length b length c angle alpha angle beta angle gamma 38.050 53.490 53.900 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.28 Å
ligand		enzyme	Transferase E.C.2.7.7 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Molecular basis for PrimPol recruitment to replication forks by RPA., Guilliam TA, Brissett NC, Ehlinger A, Keen BA, Kolesar P, Taylor EM, Bailey LJ, Lindsay HD, Chazin WJ, Doherty AJ, Nat Commun. 2017 May 23;8:15222. doi: 10.1038/ncomms15222. PMID:28534480

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk] Biological Unit Coordinates (5n8a.pdb1.gz) 47 Kb CSU: Contacts of Structural Units for 5N8A Structure Factors (1074 Kb) Retrieve 5N8A in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5N8A from S2C, [Save to disk] Re-refined 5n8a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5N8A in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5N8A

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5n8a_A] [5n8a_X] SWISS-PROT database: Domain organization of by SWISSPFAM

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Community annotation for 5N8A at PDBWiki (http://pdbwiki.org)

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