5N92 Immune System date Feb 24, 2017
title Crystal Structure Of Human Il-17af
authors J.M.Rondeau, A.Goepfert
compound source
Molecule: Interleukin-17a
Chain: A
Synonym: Il-17a,Cytotoxic T-Lymphocyte-Associated Antigen 8
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Il17a, Ctla8, Il17
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293s
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pci

Molecule: Interleukin-17f
Chain: F
Synonym: Il-17f,Cytokine Ml-1
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Il17f
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293s
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pci
symmetry Space Group: P 41 2 2
R_factor 0.205 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
87.380 87.380 126.330 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
Gene
Ontology
ChainFunctionProcessComponent
A


F


Primary referenceThe human IL-17A/F heterodimer: a two-faced cytokine with unique receptor recognition properties., Goepfert A, Lehmann S, Wirth E, Rondeau JM, Sci Rep. 2017 Aug 21;7(1):8906. doi: 10.1038/s41598-017-08360-9. PMID:28827714
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (5n92.pdb1.gz) 79 Kb
  • CSU: Contacts of Structural Units for 5N92
  • Structure Factors (203 Kb)
  • Retrieve 5N92 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5N92 from S2C, [Save to disk]
  • View 5N92 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5N92
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5n92 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5n92_A] [5n92_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5N92
  • Community annotation for 5N92 at PDBWiki (http://pdbwiki.org)

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