5NAN Cytokine date Feb 28, 2017
title Crystal Structure Of Human Il-17af In Complex With Human Il-
authors J.M.Rondeau, A.Goepfert
compound source
Molecule: Interleukin-17a
Chain: A, D
Synonym: Il-17a,Cytotoxic T-Lymphocyte-Associated Antigen 8
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Il17a, Ctla8, Il17
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293s
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pci

Molecule: Interleukin-17 Receptor A
Chain: B, C
Synonym: Il-17ra,Cdw217
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Il17ra, Il17r
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293s Gnti-
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Prs5

Molecule: Interleukin-17f
Chain: E, F
Synonym: Il-17f,Cytokine Ml-1
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Il17f
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293s
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pci
symmetry Space Group: P 1 2 1
R_factor 0.186 R_Free 0.243
crystal
cell
length a length b length c angle alpha angle beta angle gamma
100.002 66.103 104.119 90.00 90.13 90.00
method X-Ray Diffractionresolution 3.30 Å
Gene
Ontology
ChainFunctionProcessComponent
A, D


C, B


F, E


Primary referenceThe human IL-17A/F heterodimer: a two-faced cytokine with unique receptor recognition properties., Goepfert A, Lehmann S, Wirth E, Rondeau JM, Sci Rep. 2017 Aug 21;7(1):8906. doi: 10.1038/s41598-017-08360-9. PMID:28827714
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (349 Kb) [Save to disk]
  • Biological Unit Coordinates (5nan.pdb1.gz) 171 Kb
  • Biological Unit Coordinates (5nan.pdb2.gz) 173 Kb
  • CSU: Contacts of Structural Units for 5NAN
  • Structure Factors (193 Kb)
  • Retrieve 5NAN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5NAN from S2C, [Save to disk]
  • View 5NAN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5NAN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5nan from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5nan_A] [5nan_B] [5nan_D] [5nan_F] [5nan_C] [5nan_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5NAN
  • Community annotation for 5NAN at PDBWiki (http://pdbwiki.org)

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