5NAO	Signaling Protein	date	Feb 28, 2017
title	Nmr Structure Of Tlr4 Transmembrane Domain (624-657) In Dpc
authors	K.S.Mineev, S.A.Goncharuk, M.V.Goncharuk, A.S.Arseniev
compound		source
Molecule: Toll-Like Receptor 4 Chain: A Fragment: Unp Residues 623-657 Synonym: Htoll Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tlr4 Expression_system: Escherichia Coli Expression_system_taxid: 562
method	Solution NMR
Primary reference	Spatial structure of TLR4 transmembrane domain in bicelles provides the insight into the receptor activation mechanism., Mineev KS, Goncharuk SA, Goncharuk MV, Volynsky PE, Novikova EV, Aresinev AS, Sci Rep. 2017 Jul 31;7(1):6864. doi: 10.1038/s41598-017-07250-4. PMID:28761155

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (96 Kb) [Save to disk] Biological Unit Coordinates (5nao.pdb1.gz) 10 Kb CSU: Contacts of Structural Units for 5NAO Original NMR restraints for 5NAO from PDB Retrieve 5NAO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5NAO from S2C, [Save to disk]

View 5NAO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5NAO

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5nao_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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Community annotation for 5NAO at PDBWiki (http://pdbwiki.org)

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