5NAZ Structural Protein date Feb 28, 2017
title Crystal Structures Of Homooligomers Of Collagen Type Iv. Alp
authors P.Casino, A.Marina
compound source
Molecule: Collagen Alpha-5(Iv) Chain
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Col4a5
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
symmetry Space Group: P 41 3 2
R_factor 0.185 R_Free 0.190
crystal
cell
length a length b length c angle alpha angle beta angle gamma
121.283 121.283 121.283 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.85 Å
ligand CL, PG4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (5naz.pdb1.gz) 221 Kb
  • LPC: Ligand-Protein Contacts for 5NAZ
  • CSU: Contacts of Structural Units for 5NAZ
  • Structure Factors (1227 Kb)
  • Retrieve 5NAZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5NAZ from S2C, [Save to disk]
  • View 5NAZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5NAZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5naz_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5NAZ
  • Community annotation for 5NAZ at PDBWiki (http://pdbwiki.org)

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