5NH3	Transferase	date	Mar 21, 2017
title	Crystal Structure Of The Activin Receptor Type-2a Ligand Bin Domain In Complex With Bimagrumab Fv
authors	C.Scheufler
compound		source
Molecule: Activin Receptor Type-2a Chain: A, B Synonym: Activin Receptor Type Iia,Actriia Ec: 2.7.11.30 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Acvr2a, Acvr2 Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Hek293-6e
Molecule: Anti-Human Actriib Mab Bym338 Fv Heavy-Chain Chain: H, I Synonym: Mor08159_germlined Fv		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
Molecule: Anti-Human Actriib Mab Bym338 Fv Light-Chain Chain: L, M Synonym: Mor08159_germlined Fv		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: P 1 21 1	R_factor 0.166 R_Free 0.208
crystal cell	length a length b length c angle alpha angle beta angle gamma 44.330 108.207 100.685 90.00 98.25 90.00
method	X-Ray Diffraction	resolution	2.35 Å
ligand	NAG, PCA	enzyme	Transferase E.C.2.7.11.30 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Blockade of activin type II receptors with a dual anti-ActRIIA/IIB antibody is critical to promote maximal skeletal muscle hypertrophy., Morvan F, Rondeau JM, Zou C, Minetti G, Scheufler C, Scharenberg M, Jacobi C, Brebbia P, Ritter V, Toussaint G, Koelbing C, Leber X, Schilb A, Witte F, Lehmann S, Koch E, Geisse S, Glass DJ, Lach-Trifilieff E, Proc Natl Acad Sci U S A. 2017 Nov 6. pii: 201707925. doi:, 10.1073/pnas.1707925114. PMID:29109273

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (214 Kb) [Save to disk] Biological Unit Coordinates (5nh3.pdb1.gz) 104 Kb Biological Unit Coordinates (5nh3.pdb2.gz) 106 Kb LPC: Ligand-Protein Contacts for 5NH3 CSU: Contacts of Structural Units for 5NH3 Structure Factors (1316 Kb) Retrieve 5NH3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5NH3 from S2C, [Save to disk]

View 5NH3 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5NH3

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5nh3_M] [5nh3_H] [5nh3_A] [5nh3_B] [5nh3_I] [5nh3_L] SWISS-PROT database: Domain organization of by SWISSPFAM

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Community annotation for 5NH3 at PDBWiki (http://pdbwiki.org)

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