5NOO date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A, B, D, C


Primary referenceCrystal structures of nematode (parasitic T. spiralis and free living C. elegans), compared to mammalian, thymidylate synthases (TS). Molecular docking and molecular dynamics simulations in search for nematode-specific inhibitors of TS., Jarmula A, Wilk P, Maj P, Ludwiczak J, Dowiercial A, Banaszak K, Rypniewski W, Ciesla J, Dabrowska M, Fraczyk T, Bronowska AK, Jakowiecki J, Filipek S, Rode W, J Mol Graph Model. 2017 Aug 12;77:33-50. doi: 10.1016/j.jmgm.2017.08.008. PMID:28826032
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (194 Kb) [Save to disk]
  • Biological Unit Coordinates (5noo.pdb1.gz) 96 Kb
  • Biological Unit Coordinates (5noo.pdb2.gz) 96 Kb
  • CSU: Contacts of Structural Units for 5NOO
  • Structure Factors (735 Kb)
  • Retrieve 5NOO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5NOO from S2C, [Save to disk]
  • Re-refined 5noo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5NOO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5noo] [5noo_A] [5noo_B] [5noo_C] [5noo_D]
  • SWISS-PROT database:

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