5NQA	Transferase	date	Apr 19, 2017
title	Crystal Structure Of Galnac-T4 In Complex With The Monoglyco
authors	M.De Las Rivas, E.Lira-Navarrete, E.J.P.Daniel, I.Companon, H.Co A.Diniz, J.Jimenez-Barbero, J.M.Peregrina, H.Clausen, F.Corzana F.Marcelo, G.Jimenez-Oses, T.A.Gerken, R.Hurtado-Guerrero
compound		source
Molecule: Polypeptide N-Acetylgalactosaminyltransferase 4 Chain: A, B Synonym: Polypeptide Galnac Transferase 4,Pp-Gantase 4,Prot Acetylgalactosaminyltransferase 4,Udp-Galnac: Polypeptide N- Acetylgalactosaminyltransferase 4; Ec: 2.4.1.41 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Galnt4 Expression_system: Komagataella Pastoris Expression_system_taxid: 4922
Molecule: Monoglycopeptide 3 Chain: G Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606
symmetry	Space Group: P 1	R_factor 0.225 R_Free 0.274
crystal cell	length a length b length c angle alpha angle beta angle gamma 65.447 79.881 88.614 116.47 96.74 104.72
method	X-Ray Diffraction	resolution	1.90 Å
ligand	EDO, GOL, NGA	enzyme	Transferase E.C.2.4.1.41 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	The interdomain flexible linker of the polypeptide GalNAc transferases dictates their long-range glycosylation preferences., Rivas ML, Lira-Navarrete E, Daniel EJP, Companon I, Coelho H, Diniz A, Jimenez-Barbero J, Peregrina JM, Clausen H, Corzana F, Marcelo F, Jimenez-Oses G, Gerken TA, Hurtado-Guerrero R, Nat Commun. 2017 Dec 5;8(1):1959. doi: 10.1038/s41467-017-02006-0. PMID:29208955

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (378 Kb) [Save to disk] Biological Unit Coordinates (5nqa.pdb1.gz) 183 Kb Biological Unit Coordinates (5nqa.pdb2.gz) 189 Kb LPC: Ligand-Protein Contacts for 5NQA CSU: Contacts of Structural Units for 5NQA Structure Factors (4813 Kb) Retrieve 5NQA in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5NQA from S2C, [Save to disk]

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5nqa_B] [5nqa_G] [5nqa_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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