OCA Atlas for 5NSM

5NSM

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

BCT, MN

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, L, I, A, D, K, C, J, G, F, E, H

Primary reference

Structural Characterization of Acidic M17 Leucine Aminopeptidases from the TriTryps and Evaluation of Their Role in Nutrient Starvation in Trypanosoma brucei., Timm J, Valente M, Garcia-Caballero D, Wilson KS, Gonzalez-Pacanowska D, mSphere. 2017 Aug 16;2(4). pii: e00226-17. doi: 10.1128/mSphere.00226-17., eCollection 2017 Jul-Aug. PMID:28815215

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (919 Kb) [Save to disk]

Biological Unit Coordinates (5nsm.pdb1.gz) 462 Kb

Biological Unit Coordinates (5nsm.pdb2.gz) 461 Kb

Biological Unit Coordinates (5nsm.pdb3.gz) 459 Kb

LPC: Ligand-Protein Contacts for 5NSM

CSU: Contacts of Structural Units for 5NSM

Structure Factors (11032 Kb)

Retrieve 5NSM in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5NSM from S2C, [Save to disk]

Re-refined 5nsm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5NSM in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5nsm_A] [5nsm_B] [5nsm_C] [5nsm_D] [5nsm_E] [5nsm_F] [5nsm_G] [5nsm_H] [5nsm_I] [5nsm_J] [5nsm_K] [5nsm_L]

SWISS-PROT database:

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