5NUG Motor Protein date Apr 30, 2017
title Motor Domains From Human Cytoplasmic Dynein-1 In The Phi-Par Conformation
authors K.Zhang, H.E.Foster, A.P.Carter
compound source
Molecule: Cytoplasmic Dynein 1 Heavy Chain 1
Chain: A, B
Synonym: Cytoplasmic Dynein Heavy Chain 1,Dynein Heavy Chai Cytosolic;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Dync1h1, Dhc1, Dnch1, Dncl, Dnecl, Dyhc, Kiaa0325
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.80 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • retrograde axonal transport
  • establishment of spindle loc...
  • minus-end-directed vesicle t...

  • Primary referenceCryo-EM Reveals How Human Cytoplasmic Dynein Is Auto-inhibited and Activated., Zhang K, Foster HE, Rondelet A, Lacey SE, Bahi-Buisson N, Bird AW, Carter AP, Cell. 2017 Jun 15;169(7):1303-1314.e18. doi: 10.1016/j.cell.2017.05.025. Epub, 2017 Jun 8. PMID:28602352
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (975 Kb) [Save to disk]
  • Biological Unit Coordinates (5nug.pdb1.gz) 485 Kb
  • Biological Unit Coordinates (5nug.pdb2.gz) 484 Kb
  • CSU: Contacts of Structural Units for 5NUG
  • Retrieve 5NUG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5NUG from S2C, [Save to disk]
  • View 5NUG in 3D
  • Proteopedia, because life has more than 2D.
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  • Visual 3D analysis of 5NUG
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5nug from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5nug_A] [5nug_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5NUG
  • Community annotation for 5NUG at PDBWiki (http://pdbwiki.org)

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