5NWX Transcription date May 08, 2017
title Insight Into The Molecular Recognition Mechanism Of The Coac Ncoa1 By Stat6
authors L.Russo, K.Giller, E.Pfitzner, C.Griesinger, S.Becker
compound source
Molecule: Nuclear Receptor Coactivator 1
Chain: A
Fragment: Unp Residues 257-385
Synonym: Ncoa-1,Nuclear Receptor Coactivator Protein 1,Mnrc Receptor Coactivator 1,Src-1;
Ec: 2.3.1.48
Engineered: Yes
Mutation: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Ncoa1, Src1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Pet16b

Molecule: Signal Transducer And Activator Of Transcription
Chain: B
Fragment: Unp Residues 783-814
Synonym: Il-4 Stat
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Stat6
Expression_system: Synthetic Construct
Expression_system_taxid: 32630
symmetry Space Group: P 62
R_factor 0.184 R_Free 0.235
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.631 61.631 73.283 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.51 Å
ligand
enzyme Transferase E.C.2.3.1.48 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceInsight into the molecular recognition mechanism of the coactivator NCoA1 by STAT6., Russo L, Giller K, Pfitzner E, Griesinger C, Becker S, Sci Rep. 2017 Dec 4;7(1):16845. doi: 10.1038/s41598-017-17088-5. PMID:29203888
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (24 Kb) [Save to disk]
  • Biological Unit Coordinates (5nwx.pdb1.gz) 19 Kb
  • CSU: Contacts of Structural Units for 5NWX
  • Structure Factors (81 Kb)
  • Retrieve 5NWX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5NWX from S2C, [Save to disk]
  • View 5NWX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5NWX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5nwx_A] [5nwx_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5NWX
  • Community annotation for 5NWX at PDBWiki (http://pdbwiki.org)

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