5NWZ Hormone Growth Factor date May 09, 2017
title Fibroblast Growth Factor Receptor 4 Kinase Domain (449-753) With Irreversible Ligand Cga159527
authors C.Zou
compound source
Molecule: Fibroblast Growth Factor Receptor 4
Chain: A, B
Synonym: Fgfr-4
Ec: 2.7.10.1
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.398 75.958 181.052 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.37 Å
ligand 9CT enzyme Transferase E.C.2.7.10.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceApproaches to selective fibroblast growth factor receptor 4 inhibition through targeting the ATP-pocket middle-hinge region., Fairhurst RA, Knoepfel T, Leblanc C, Buschmann N, Gaul C, Blank J, Galuba I, Trappe J, Zou C, Voshol J, Genick C, Brunet-Lefeuvre P, Bitsch F, Graus-Porta D, Furet P, Medchemcomm. 2017 Jun 8;8(8):1604-1613. doi: 10.1039/c7md00213k. eCollection 2017, Aug 1. PMID:30108871
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (96 Kb) [Save to disk]
  • Biological Unit Coordinates (5nwz.pdb1.gz) 47 Kb
  • Biological Unit Coordinates (5nwz.pdb2.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 5NWZ
  • CSU: Contacts of Structural Units for 5NWZ
  • Structure Factors (916 Kb)
  • Retrieve 5NWZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5NWZ from S2C, [Save to disk]
    • View 5NWZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5NWZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5nwz_B] [5nwz_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5NWZ
  • Community annotation for 5NWZ at PDBWiki (http://pdbwiki.org)

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