5O2Q Structure From Cyana 3.97 date May 22, 2017
title P130cas Sh3 Domain Vinculin Peptide Chimera
authors R.Hexnerova, V.Veverka
compound source
Molecule: Breast Cancer Anti-Estrogen Resistance 1,Vinculin
Chain: A
Synonym: Cas Sh3 Domain Vinculin Peptide Chimera,Cas Sh3 Do Vinculin Peptide Chimera;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bcar1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural characterization of CAS SH3 domain selectivity and regulation reveals new CAS interaction partners., Gemperle J, Hexnerova R, Lepsik M, Tesina P, Dibus M, Novotny M, Brabek J, Veverka V, Rosel D, Sci Rep. 2017 Aug 14;7(1):8057. doi: 10.1038/s41598-017-08303-4. PMID:28808245
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (988 Kb) [Save to disk]
  • Biological Unit Coordinates (5o2q.pdb1.gz) 25 Kb
  • CSU: Contacts of Structural Units for 5O2Q
  • Original NMR restraints for 5O2Q from PDB
  • Retrieve 5O2Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5O2Q from S2C, [Save to disk]
    • View 5O2Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5O2Q
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5o2q_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5O2Q
  • Community annotation for 5O2Q at PDBWiki (http://pdbwiki.org)

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