5OAB Hydrolase date Jun 21, 2017
title A Novel Crystal Form Of Human Rnase6 At Atomic Resolution
authors G.Prats-Ejarque, M.Moussaoui, E.Boix
compound source
Molecule: Ribonuclease K6
Chain: A
Fragment: Unp Residues 24-150
Synonym: Rnase K6
Ec: 3.1.27.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rnase6, Rns6
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11c
symmetry Space Group: I 2 3
R_factor 0.117 R_Free 0.141
crystal
cell
length a length b length c angle alpha angle beta angle gamma
95.405 95.405 95.405 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.11 Å
ligand CL, K, NA, PO4 enzyme Hydrolase E.C.3.1.27 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk]
  • Biological Unit Coordinates (5oab.pdb1.gz) 87 Kb
  • LPC: Ligand-Protein Contacts for 5OAB
  • CSU: Contacts of Structural Units for 5OAB
  • Structure Factors (2257 Kb)
  • Retrieve 5OAB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5OAB from S2C, [Save to disk]
  • View 5OAB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5OAB
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5oab_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5OAB
  • Community annotation for 5OAB at PDBWiki (http://pdbwiki.org)

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