5OBN Splicing date Jun 28, 2017
title Nmr Solution Structure Of U11u12 65k Protein'S C-Terminal R (381-516)
authors A.J.Norppa, T.M.Kauppala, H.A.Heikkinen, B.Verma, H.Iwai, M.J.Fri
compound source
Molecule: Rna-Binding Protein 40
Chain: A
Synonym: Rna-Binding Motif Protein 40,Rna-Binding Region-Co Protein 3,U11u12 Small Nuclear Ribonucleoprotein 65 Kda Pr U11u12-65k;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rnpc3, Kiaa1839, Rbm40, Rnp
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMutations in the U11/U12-65K protein associated with isolated growth hormone deficiency lead to structural destabilization and impaired binding of U12 snRNA., Norppa AJ, Kauppala TM, Heikkinen HA, Verma B, Iwai H, Frilander MJ, RNA. 2017 Dec 18. pii: rna.062844.117. doi: 10.1261/rna.062844.117. PMID:29255062
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (728 Kb) [Save to disk]
  • Biological Unit Coordinates (5obn.pdb1.gz) 37 Kb
  • CSU: Contacts of Structural Units for 5OBN
  • Original NMR restraints for 5OBN from PDB
  • Retrieve 5OBN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5OBN from S2C, [Save to disk]
    • View 5OBN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5OBN
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5obn_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5OBN
  • Community annotation for 5OBN at PDBWiki (http://pdbwiki.org)

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