5OCN Transcription date Jul 03, 2017
title Crystal Structure Of The Forkhead Domain Of Human Foxn1
authors J.A.Newman, H.Aitkenhead, D.M.Pinkas, F.Von Delft, C.H.Arrowsmit A.Edwwards, C.Bountra, O.Gileadi
compound source
Molecule: Forkhead Box Protein N1
Chain: A, B, C, D, E, F, G, H
Synonym: Winged-Helix Transcription Factor Nude
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Foxn1, Ronu, Whn
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Rosetta
symmetry Space Group: P 21 21 21
R_factor 0.251 R_Free 0.284
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.141 78.203 263.479 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand K enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (232 Kb) [Save to disk]
  • Biological Unit Coordinates (5ocn.pdb1.gz) 31 Kb
  • Biological Unit Coordinates (5ocn.pdb2.gz) 31 Kb
  • Biological Unit Coordinates (5ocn.pdb3.gz) 30 Kb
  • Biological Unit Coordinates (5ocn.pdb4.gz) 30 Kb
  • Biological Unit Coordinates (5ocn.pdb5.gz) 30 Kb
  • Biological Unit Coordinates (5ocn.pdb6.gz) 31 Kb
  • Biological Unit Coordinates (5ocn.pdb7.gz) 29 Kb
  • Biological Unit Coordinates (5ocn.pdb8.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 5OCN
  • CSU: Contacts of Structural Units for 5OCN
  • Structure Factors (1029 Kb)
  • Retrieve 5OCN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5OCN from S2C, [Save to disk]
  • Re-refined 5ocn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5OCN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5OCN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ocn_E] [5ocn_H] [5ocn_C] [5ocn_B] [5ocn_G] [5ocn_F] [5ocn_D] [5ocn_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5OCN
  • Community annotation for 5OCN at PDBWiki (http://pdbwiki.org)

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