5OCU Transport Protein date Jul 03, 2017
title Molecular Basis Of Human Kinesin-8 Function And Inhibition
authors J.Locke, A.P.Joseph, M.Topf, C.A.Moores
compound source
Molecule: Kinesin-Like Protein Kif18a
Chain: K
Synonym: Marrow Stromal Kif18a,Ms-Kif18a
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Kif18a, Oksw-Cl.108
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008

Molecule: Tubulin Alpha Chain
Chain: A

Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: Tubulin Beta Chain
Chain: B
Synonym: Beta-Tubulin

Organism_scientific: Sus Scrofa
Organism_common: Pig
Organism_taxid: 9823
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 5.20 Å
Gene
Ontology
ChainFunctionProcessComponent
A


B


K


Primary referenceStructural basis of human kinesin-8 function and inhibition., Locke J, Joseph AP, Pena A, Mockel MM, Mayer TU, Topf M, Moores CA, Proc Natl Acad Sci U S A. 2017 Oct 23. pii: 201712169. doi:, 10.1073/pnas.1712169114. PMID:29078367
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk]
  • Biological Unit Coordinates (5ocu.pdb1.gz) 97 Kb
  • CSU: Contacts of Structural Units for 5OCU
  • Retrieve 5OCU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5OCU from S2C, [Save to disk]
  • View 5OCU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5OCU
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5ocu from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ocu_K] [5ocu_B] [5ocu_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5OCU
  • Community annotation for 5OCU at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science