5OD6 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural basis for genome wide recognition of 5-bp GC motifs by SMAD transcription factors., Martin-Malpartida P, Batet M, Kaczmarska Z, Freier R, Gomes T, Aragon E, Zou Y, Wang Q, Xi Q, Ruiz L, Vea A, Marquez JA, Massague J, Macias MJ, Nat Commun. 2017 Dec 12;8(1):2070. doi: 10.1038/s41467-017-02054-6. PMID:29234012
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (120 Kb) [Save to disk]
  • Biological Unit Coordinates (5od6.pdb1.gz) 114 Kb
  • LPC: Ligand-Protein Contacts for 5OD6
  • CSU: Contacts of Structural Units for 5OD6
  • Structure Factors (917 Kb)
  • Retrieve 5OD6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5OD6 from S2C, [Save to disk]
  • View 5OD6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5od6_A] [5od6_B] [5od6_C] [5od6_D]
  • SWISS-PROT database:

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