5ODT Transferase date Jul 06, 2017
title Aurora-A In Complex With Tacc3
authors S.G.Burgess, R.Bayliss
compound source
Molecule: Aurora Kinase A
Chain: A
Fragment: Unp Residues 122-403
Synonym: Aurora 2,Auroraipl1-Related Kinase 1,Hark1,Breast Amplified Kinase,Serinethreonine-Protein Kinase 15,Serine Protein Kinase 6,Serinethreonine-Protein Kinase Aurora-A;
Ec: 2.7.11.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Aurka, Aik, Airk1, Ark1, Aura, Ayk1, Btak, Iak1, Stk1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pcdf

Molecule: Transforming Acidic Coiled-Coil-Containing Protei
Chain: B
Fragment: Unp Residues 519-563
Synonym: Eric-1
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tacc3, Eric1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Petm6t1
symmetry Space Group: I 2 3
R_factor 0.178 R_Free 0.211
crystal
cell
length a length b length c angle alpha angle beta angle gamma
137.040 137.040 137.040 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.02 Å
ligand
enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceMitotic spindle association of TACC3 requires Aurora-A-dependent stabilization of a cryptic alpha-helix., Burgess SG, Mukherjee M, Sabir S, Joseph N, Gutierrez-Caballero C, Richards MW, Huguenin-Dezot N, Chin JW, Kennedy EJ, Pfuhl M, Royle SJ, Gergely F, Bayliss R, EMBO J. 2018 Mar 6. pii: embj.201797902. doi: 10.15252/embj.201797902. PMID:29510984
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (5odt.pdb1.gz) 54 Kb
  • CSU: Contacts of Structural Units for 5ODT
  • Structure Factors (1146 Kb)
  • Retrieve 5ODT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5ODT from S2C, [Save to disk]
  • View 5ODT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5ODT
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5odt from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5odt_B] [5odt_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5ODT
  • Community annotation for 5ODT at PDBWiki (http://pdbwiki.org)

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