5OTE Cell Invasion date Aug 21, 2017
title Mrck Beta In Complex With Bdp-00008900
authors A.W.Schuettelkopf
compound source
Molecule: Serinethreonine-Protein Kinase Mrck Beta
Chain: A
Synonym: Cdc42-Binding Protein Kinase Beta,Cdc42bp-Beta,Dmp Beta,Myotonic Dystrophy Kinase-Related Cdc42-Binding Kinase Myotonic Dystrophy Protein Kinase-Like Beta;
Ec: 2.7.11.1
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cdc42bpb, Kiaa1124
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
symmetry Space Group: C 1 2 1
R_factor 0.196 R_Free 0.218
crystal
cell
length a length b length c angle alpha angle beta angle gamma
114.530 44.300 90.940 90.00 106.86 90.00
method X-Ray Diffractionresolution 1.68 Å
ligand AQE, CL, EDO enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery of potent and selective MRCK inhibitors with therapeutic effect on skin cancer., Unbekandt M, Belshaw S, Bower J, Clarke M, Cordes J, Crighton D, Croft DR, Drysdale MJ, Garnett MJ, Gill K, Gray C, Greenhalgh DA, Hall JA, Konczal J, Lilla S, McArthur D, McConnell P, McDonald L, McGarry L, McKinnon H, McMenemy C, Mezna M, Morrice NA, Munro J, Naylor G, Rath N, Schuttelkopf AW, Sime M, Olson MF, Cancer Res. 2018 Jan 30. pii: 0008-5472.CAN-17-2870. doi:, 10.1158/0008-5472.CAN-17-2870. PMID:29382705
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (147 Kb) [Save to disk]
  • Biological Unit Coordinates (5ote.pdb1.gz) 281 Kb
  • LPC: Ligand-Protein Contacts for 5OTE
  • CSU: Contacts of Structural Units for 5OTE
  • Structure Factors (3241 Kb)
  • Retrieve 5OTE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5OTE from S2C, [Save to disk]
    • View 5OTE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5OTE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ote_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5OTE
  • Community annotation for 5OTE at PDBWiki (http://pdbwiki.org)

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