5OU7 Blood Clotting date Aug 23, 2017
title Crystal Structure Of The Glycoprotein Vi Loop Truncation Mut Papykn
authors L.J.Feitsma, E.G.Huizinga
compound source
Molecule: Platelet Glycoprotein Vi
Chain: A, B, C, D
Synonym: Gpvi,Glycoprotein 6
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gp6
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293-Ebna1-S
symmetry Space Group: P 1 21 1
R_factor 0.221 R_Free 0.260
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.650 44.050 117.660 90.00 104.69 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand CL, NAG, PG6, PO4 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (241 Kb) [Save to disk]
  • Biological Unit Coordinates (5ou7.pdb1.gz) 61 Kb
  • Biological Unit Coordinates (5ou7.pdb2.gz) 62 Kb
  • Biological Unit Coordinates (5ou7.pdb3.gz) 59 Kb
  • Biological Unit Coordinates (5ou7.pdb4.gz) 60 Kb
  • LPC: Ligand-Protein Contacts for 5OU7
  • CSU: Contacts of Structural Units for 5OU7
  • Structure Factors (1694 Kb)
  • Retrieve 5OU7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5OU7 from S2C, [Save to disk]
    • View 5OU7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5OU7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ou7_C] [5ou7_A] [5ou7_D] [5ou7_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5OU7
  • Community annotation for 5OU7 at PDBWiki (http://pdbwiki.org)

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