5OVL Oxidoreductase date Aug 29, 2017
title Crystal Structure Of Maba Bound To Nadp+ From M. Smegmatis
authors T.Kussau, N.Van Wyk, A.Viljoen, V.Olieric, M.Flipo, L.Kremer, M.Bl
compound source
Molecule: 3-Oxoacyl-[Acyl-Carrier-Protein] Reductase Fabg
Chain: A, B, C, D
Synonym: 3-Ketoacyl-Acyl Carrier Protein Reductase,Beta-Ket Carrier Protein Reductase,Beta-Ketoacyl-Acp Reductase;
Ec: 1.1.1.100
Engineered: Yes
Organism_scientific: Mycobacterium Smegmatis (Strain Atcc 7 Mc(2)155);
Organism_taxid: 246196
Strain: Atcc 700084 Mc(2)155
Gene: Fabg, Msmeg_3150, Msmei_3069
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Plyss
symmetry Space Group: P 21 21 21
R_factor 0.168 R_Free 0.219
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.140 69.390 223.650 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand NAP enzyme Oxidoreductase E.C.1.1.1.100 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructural rearrangements occurring upon cofactor binding in the Mycobacterium smegmatis beta-ketoacyl-acyl carrier protein reductase MabA., Kussau T, Flipo M, Van Wyk N, Viljoen A, Olieric V, Kremer L, Blaise M, Acta Crystallogr D Struct Biol. 2018 May 1;74(Pt 5):383-393. doi:, 10.1107/S2059798318002917. Epub 2018 Apr 24. PMID:29717709
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (304 Kb) [Save to disk]
  • Biological Unit Coordinates (5ovl.pdb1.gz) 292 Kb
  • LPC: Ligand-Protein Contacts for 5OVL
  • CSU: Contacts of Structural Units for 5OVL
  • Structure Factors (680 Kb)
  • Retrieve 5OVL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5OVL from S2C, [Save to disk]
  • View 5OVL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5OVL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ovl_D] [5ovl_C] [5ovl_B] [5ovl_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5OVL
  • Community annotation for 5OVL at PDBWiki (http://pdbwiki.org)

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