5OVR Hydrolase date Aug 29, 2017
title X-Ray Characterization Of Striatal-Enriched Protein Tyrosine Phosphatase Inhibitors
authors H.Kack, L.Wissler
compound source
Molecule: Tyrosine-Protein Phosphatase Non-Receptor Type 5
Chain: A
Synonym: Neural-Specific Protein-Tyrosine Phosphatase,Stria Enriched Protein-Tyrosine Phosphatase,Step;
Ec: 3.1.3.48
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ptpn5
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.214 R_Free 0.291
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.500 64.320 100.430 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.15 Å
ligand AXK, CSO enzyme Hydrolase E.C.3.1.3.48 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray Characterization and Structure-Based Optimization of Striatal-Enriched Protein Tyrosine Phosphatase Inhibitors., Witten MR, Wissler L, Snow M, Geschwindner S, Read JA, Brandon NJ, Nairn AC, Lombroso PJ, Kack H, Ellman JA, J Med Chem. 2017 Nov 8. doi: 10.1021/acs.jmedchem.7b01292. PMID:29116812
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (5ovr.pdb1.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 5OVR
  • CSU: Contacts of Structural Units for 5OVR
  • Structure Factors (655 Kb)
  • Retrieve 5OVR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5OVR from S2C, [Save to disk]
  • View 5OVR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5OVR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ovr_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5OVR
  • Community annotation for 5OVR at PDBWiki (http://pdbwiki.org)

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