5OWT Transferase date Sep 04, 2017
title Crystal Structure Of Tnks2 In Complex With (5s)-5-Methyl-5-[ 3,4-Dihydroquinazolin-2-Yl)Phenyl]Imidazolidine-2,4-Dione
authors Y.Nkizinkiko, T.Haikarainen, L.Lehtio
compound source
Molecule: Tankyrase-2
Chain: A, B
Synonym: Tank2,Adp-Ribosyltransferase Diphtheria Toxin-Like Poly [Adp-Ribose] Polymerase 5b,Tnks-2,Trf1-Interacting Ank Related Adp-Ribose Polymerase 2,Tankyrase II,Tankyrase-Like Tankyrase-Related Protein;
Ec: 2.4.2.30
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tnks2, Parp5b, Tank2, Tnkl
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Rosetta 2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic28-Bsa4
symmetry Space Group: C 2 2 21
R_factor 0.188 R_Free 0.237
crystal
cell
length a length b length c angle alpha angle beta angle gamma
89.000 98.230 113.380 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand F37, SO4, ZN enzyme Transferase E.C.2.4.2.30 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary reference2-Phenylquinazolinones as dual-activity tankyrase-kinase inhibitors., Nkizinkiko Y, Desantis J, Koivunen J, Haikarainen T, Murthy S, Sancineto L, Massari S, Ianni F, Obaji E, Loza MI, Pihlajaniemi T, Brea J, Tabarrini O, Lehtio L, Sci Rep. 2018 Jan 26;8(1):1680. doi: 10.1038/s41598-018-19872-3. PMID:29374194
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (5owt.pdb1.gz) 71 Kb
  • LPC: Ligand-Protein Contacts for 5OWT
  • CSU: Contacts of Structural Units for 5OWT
  • Structure Factors (711 Kb)
  • Retrieve 5OWT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5OWT from S2C, [Save to disk]
  • View 5OWT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5OWT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5owt_A] [5owt_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5OWT
  • Community annotation for 5OWT at PDBWiki (http://pdbwiki.org)

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