5QIL TGF-BETA RECEPTOR TYPE 1 KINASE DOMAIN (T204D) IN COMPLEX WITH N-{4-[3-(6-METHOXYPYRIDIN-3-YL)-1H-PYRROLO[3,2-B]PYRIDIN-2-YL]PYRIDIN-2-YL}ACETAMIDE date
authors Sheriff, S.
compound source
symmetry
R_factor
R_Free 0.2098
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.98
ligand J2V enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery of 4-Azaindole Inhibitors of TGFbetaRI as Immuno-oncology Agents., Zhang Y, Zhao Y, Tebben AJ, Sheriff S, Ruzanov M, Fereshteh MP, Fan Y, Lippy J, Swanson J, Ho CP, Wautlet BS, Rose A, Parrish K, Yang Z, Donnell AF, Zhang L, Fink BE, Vite GD, Augustine-Rauch K, Fargnoli J, Borzilleri RM, ACS Med Chem Lett. 2018 Oct 17;9(11):1117-1122. doi:, 10.1021/acsmedchemlett.8b00357. eCollection 2018 Nov 8. PMID:30429955
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (5qil.pdb1.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 5QIL
  • CSU: Contacts of Structural Units for 5QIL
  • Structure Factors (1303 Kb)
  • Retrieve 5QIL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5QIL from S2C, [Save to disk]
    • View 5QIL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5QIL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5qil_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5QIL
  • Community annotation for 5QIL at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science