5QQH Hydrolase Transferase date May 03, 2019
title Pandda Analysis Group Deposition -- Crystal Structure Of Kal In Complex With Molport-020-096-465
authors J.L.Gray, T.Krojer, R.Talon, A.Douangamath, C.Jimenez Antunez, C. C.H.Arrowsmith, A.Edwards, P.E.Brennan, F.Von Delft
compound source
Molecule: Ras-Related C3 Botulinum Toxin Substrate 1
Chain: A
Synonym: Cell Migration-Inducing Gene 5 Protein,Ras-Like Pr Tc25,P21-Rac1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rac1, Tc25, Mig5
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Kalirin
Chain: B
Synonym: Huntingtin-Associated Protein-Interacting Protein, Duo,Serinethreonine-Protein Kinase With Dbl- And Pleckstri Domain;
Ec: 2.7.11.1
Engineered: Yes
Mutation: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Kalrn, Duet, Duo, Hapip, Trad
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 65 2 2
R_factor 0.200 R_Free 0.263
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.659 62.659 342.820 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.09 Å
ligand EDO, N67 enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk]
  • Biological Unit Coordinates (5qqh.pdb1.gz) 62 Kb
  • LPC: Ligand-Protein Contacts for 5QQH
  • CSU: Contacts of Structural Units for 5QQH
  • Structure Factors (4721 Kb)
  • Retrieve 5QQH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5QQH from S2C, [Save to disk]
  • View 5QQH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5QQH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5qqh_B] [5qqh_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5QQH
  • Community annotation for 5QQH at PDBWiki (http://pdbwiki.org)

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