5RGA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 6NT, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceEnsemble-based enzyme design can recapitulate the effects of laboratory directed evolution in silico., Broom A, Rakotoharisoa RV, Thompson MC, Zarifi N, Nguyen E, Mukhametzhanov N, Liu L, Fraser JS, Chica RA, Nat Commun. 2020 Sep 23;11(1):4808. doi: 10.1038/s41467-020-18619-x. PMID:32968058
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (308 Kb) [Save to disk]
  • Biological Unit Coordinates (5rga.pdb1.gz) 301 Kb
  • LPC: Ligand-Protein Contacts for 5RGA
  • CSU: Contacts of Structural Units for 5RGA
  • Structure Factors (606 Kb)
  • Retrieve 5RGA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5RGA from S2C, [Save to disk]
  • View 5RGA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5rga_A] [5rga_B]
  • SWISS-PROT database:

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