5SVE Hydrolase date Aug 05, 2016
title Structure Of Calcineurin In Complex With Nfatc1 Lxvp Peptide
authors S.R.Sheftic, R.Page, W.Peti
compound source
Molecule: Serinethreonine-Protein Phosphatase 2b Catalytic Alpha Isoform;
Chain: A
Synonym: Cam-Prp Catalytic Subunit,Calmodulin-Dependent Cal Subunit Alpha Isoform;
Ec: 3.1.3.16
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ppp3ca, Calna, Cna
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Calcineurin Subunit B Type 1
Chain: B
Synonym: Protein Phosphatase 2b Regulatory Subunit 1,Protei Phosphatase 3 Regulatory Subunit B Alpha Isoform 1;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ppp3r1, Cna2, Cnb
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Nfatc1 Lxvp Peptide
Chain: C
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor 0.195 R_Free 0.239
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.679 106.046 111.913 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand CA, FE, ZN enzyme Hydrolase E.C.3.1.3.16 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B
  • calcium-dependent protein se...
  • positive regulation of prote...

  • Primary referenceInvestigating the human Calcineurin Interaction Network using the piLxVP SLiM., Sheftic SR, Page R, Peti W, Sci Rep. 2016 Dec 15;6:38920. doi: 10.1038/srep38920. PMID:27974827
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]
  • Biological Unit Coordinates (5sve.pdb1.gz) 88 Kb
  • LPC: Ligand-Protein Contacts for 5SVE
  • CSU: Contacts of Structural Units for 5SVE
  • Structure Factors (1369 Kb)
  • Retrieve 5SVE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5SVE from S2C, [Save to disk]
  • Re-refined 5sve structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5SVE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5SVE
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5sve from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5sve_B] [5sve] [5sve_C] [5sve_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5SVE
  • Community annotation for 5SVE at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science