OCA Atlas for 5SWZ

5SWZ

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

NA, SO4

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, Q, L, G

Primary reference

Reversed T Cell Receptor Docking on a Major Histocompatibility Class I Complex Limits Involvement in the Immune Response., Gras S, Chadderton J, Del Campo CM, Farenc C, Wiede F, Josephs TM, Sng XY, Mirams M, Watson KA, Tiganis T, Quinn KM, Rossjohn J, La Gruta NL, Immunity. 2016 Oct 18;45(4):749-760. doi: 10.1016/j.immuni.2016.09.007. Epub 2016, Oct 4. PMID:27717799

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1111 Kb) [Save to disk]

Biological Unit Coordinates (5swz.pdb1.gz) 285 Kb

Biological Unit Coordinates (5swz.pdb2.gz) 285 Kb

Biological Unit Coordinates (5swz.pdb3.gz) 288 Kb

Biological Unit Coordinates (5swz.pdb4.gz) 273 Kb

LPC: Ligand-Protein Contacts for 5SWZ

CSU: Contacts of Structural Units for 5SWZ

Structure Factors (8643 Kb)

Retrieve 5SWZ in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5SWZ from S2C, [Save to disk]

Re-refined 5swz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5SWZ in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5swz] [5swz_A] [5swz_B] [5swz_C] [5swz_D] [5swz_E] [5swz_F] [5swz_G] [5swz_H] [5swz_I] [5swz_J] [5swz_K] [5swz_L] [5swz_M] [5swz_N] [5swz_O] [5swz_P] [5swz_Q] [5swz_R] [5swz_S] [5swz_T]

SWISS-PROT database:

Domains found in 5SWZ: [IG_like] [IGc1] [IGv ] by SMART

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