5T01	Transcription Regulator Dna	date	Aug 15, 2016
title	Human C-Jun Dna Binding Domain Homodimer In Complex With Met Dna
authors	S.Hong, J.R.Horton, X.Cheng
compound		source
Molecule: Dna (5'- D(Pcptpcpcptpaptpgpapcptpcpgptpcpcpapt)-3 Chain: C Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: Dna (5'-D(Apaptpgpgpap(5cm) Pgpapgptpcpaptpapgpgpapg)-3'); Chain: D Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: Transcription Factor Ap-1 Chain: A, B Fragment: Dna Binding Domain (Unp Residues 254-315) Synonym: Activator Protein 1,Ap1,Proto-Oncogene C-Jun,V-Jun Sarcoma Virus 17 Oncogene Homolog,P39; Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Jun Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.193 R_Free 0.227
crystal cell	length a length b length c angle alpha angle beta angle gamma 158.871 42.490 45.167 90.00 98.01 90.00
method	X-Ray Diffraction	resolution	1.89 Å
ligand	5CM	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Methyl-dependent and spatial-specific DNA recognition by the orthologous transcription factors human AP-1 and Epstein-Barr virus Zta., Hong S, Wang D, Horton JR, Zhang X, Speck SH, Blumenthal RM, Cheng X, Nucleic Acids Res. 2017 Mar 17;45(5):2503-2515. doi: 10.1093/nar/gkx057. PMID:28158710

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk] Biological Unit Coordinates (5t01.pdb1.gz) 77 Kb LPC: Ligand-Protein Contacts for 5T01 CSU: Contacts of Structural Units for 5T01 Structure Factors (227 Kb) Retrieve 5T01 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5T01 from S2C, [Save to disk] Re-refined 5t01 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 5T01

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5t01_A] [5t01_B] [5t01] [5t01_D] [5t01_C] SWISS-PROT database: Domain organization of by SWISSPFAM

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