5T1A	Signaling Protein	date	Aug 18, 2016
title	Structure Of Cc Chemokine Receptor 2 With Orthosteric And Al Antagonists
authors	Y.Zheng, L.Qin, N.V.Ortiz Zacarias, H.De Vries, G.W.Han, M.Gustav M.Dabros, C.Zhao, R.J.Cherney, P.Carter, D.Stamos, R.Abagyan, V.C R.C.Stevens, A.P.Ijzerman, L.H.Heitman, A.Tebben, I.Kufareva, T.
compound		source
Molecule: Chimera Protein Of Cc Chemokine Receptor Type 2 I And T4-Lysozyme,Lysozyme; Chain: A Fragment: Unp P41597-2 Residues 2-328 With Unp P00720 Resid Inserted After Residues 233; Synonym: Ccr2,Monocyte Chemoattractant Protein 1 Receptor,M Ccr2,Monocyte Chemoattractant Protein 1 Receptor,Mcp-1-R; Ec: 3.2.1.17 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens, Enterobacteria Phage T4 Organism_common: Human Organism_taxid: 9606, 10665 Gene: Ccr2, Cmkbr2, E, T4tp126 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108
symmetry	Space Group: P 21 21 21	R_factor 0.234 R_Free 0.274
crystal cell	length a length b length c angle alpha angle beta angle gamma 59.230 64.690 169.980 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.81 Å
ligand	73R, OLC, SO4, VT5, YCM, ZN	enzyme	Hydrolase E.C.3.2.1.17 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structure of CC chemokine receptor 2 with orthosteric and allosteric antagonists., Zheng Y, Qin L, Zacarias NV, de Vries H, Han GW, Gustavsson M, Dabros M, Zhao C, Cherney RJ, Carter P, Stamos D, Abagyan R, Cherezov V, Stevens RC, IJzerman AP, Heitman LH, Tebben A, Kufareva I, Handel TM, Nature. 2016 Dec 7. doi: 10.1038/nature20605. PMID:27926736

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (152 Kb) [Save to disk] Biological Unit Coordinates (5t1a.pdb1.gz) 145 Kb LPC: Ligand-Protein Contacts for 5T1A CSU: Contacts of Structural Units for 5T1A Structure Factors (350 Kb) Retrieve 5T1A in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5T1A from S2C, [Save to disk] Re-refined 5t1a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5T1A in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5T1A

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5t1a_A] [5t1a] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5T1A

Community annotation for 5T1A at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---